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Official Description

Infectious agent detection by nucleic acid (DNA or RNA); Orthopoxvirus (eg, monkeypox virus, cowpox virus, vaccinia virus), amplified probe technique, each

© Copyright 2026 American Medical Association. All rights reserved.

Common Language Description

A laboratory test is conducted to identify the presence of viruses belonging to the orthopoxvirus genus, which includes notable species such as monkeypox virus, cowpox virus, and vaccinia virus. These viruses are characterized as large, enveloped, double-stranded DNA viruses that have a particular affinity for infecting epidermal cells. Infections caused by orthopoxviruses can manifest in various ways, ranging from localized skin infections to more widespread systemic infections. The initial site of infection is typically the skin or mucosal surfaces, and in some cases, the respiratory tract may also be involved. This can lead to the development of characteristic pock lesions and symptoms associated with viremia as the virus disseminates through the lymphatic system throughout the body. To perform the test, a swab sample is collected from a skin lesion, which is then used to isolate viral DNA. The polymerase chain reaction (PCR) technique is employed to amplify the DNA target sequence, resulting in millions of copies of the viral DNA. This process involves the addition of amplification primers, which are short, synthetic strands of nucleic acid that are complementary to specific regions of the target nucleic acid fragment. These primers bind to the target DNA, allowing the polymerase enzyme to replicate the region and synthesize new nucleic acid. The amplified product fluoresces, enabling the detection and confirmation of the presence of the orthopox virus in the sample.

© Copyright 2026 Coding Ahead. All rights reserved.

1. Indications

The procedure is indicated for the detection of infections caused by orthopoxviruses, which may present with various symptoms and conditions. The following are specific indications for performing this test:

  • Suspected Orthopoxvirus Infection The test is performed when there is a clinical suspicion of an infection caused by orthopoxviruses, such as monkeypox, cowpox, or vaccinia virus, particularly in patients presenting with characteristic skin lesions.
  • Exposure History Individuals with a known exposure to orthopoxviruses, either through direct contact with infected individuals or animals, may require testing to confirm the presence of the virus.
  • Unexplained Skin Lesions The procedure is indicated for patients exhibiting unexplained skin lesions that may resemble those caused by orthopoxvirus infections, necessitating further investigation.

2. Procedure

The procedure for detecting orthopoxvirus involves several critical steps, each designed to ensure accurate identification of the viral DNA. The following outlines the procedural steps:

  • Sample Collection A swab sample is carefully collected from the skin lesion of the patient. This step is crucial as it provides the biological material needed for subsequent testing. The swab must be taken from an area that exhibits visible lesions to maximize the likelihood of detecting viral DNA.
  • DNA Isolation Once the sample is collected, the next step involves isolating the viral DNA from the swab. This process typically includes the use of specific reagents and techniques to extract the nucleic acid from the sample, ensuring that the DNA is pure and suitable for amplification.
  • Polymerase Chain Reaction (PCR) Amplification The isolated DNA undergoes polymerase chain reaction (PCR) amplification. During this step, amplification primers are added to the reaction mixture. These primers are designed to bind to specific sequences of the target viral DNA, allowing for the exponential amplification of the DNA target sequence.
  • Detection of Amplified DNA After amplification, the newly synthesized DNA is analyzed for fluorescence. The presence of fluorescence indicates that the target orthopoxvirus DNA has been successfully amplified, confirming the presence of the virus in the original sample.

3. Post-Procedure

Post-procedure care involves monitoring the patient for any immediate reactions to the sample collection. The results of the test are typically available within a specified timeframe, allowing for timely diagnosis and management of the suspected orthopoxvirus infection. It is essential for healthcare providers to communicate the results to the patient and discuss any necessary follow-up actions or treatments based on the findings. Additionally, proper documentation of the procedure and results is crucial for compliance and future reference.

Short Descr ORTHOPOXVIRUS AMP PRB EACH
Medium Descr IADNA ORTHOPOXVIRUS AMPLIFIED PROBE TECHNIQUE EA
Long Descr Infectious agent detection by nucleic acid (DNA or RNA); Orthopoxvirus (eg, monkeypox virus, cowpox virus, vaccinia virus), amplified probe technique, each
Status Code Statutory Exclusion (from MPFS, may be paid under other methodologies)
Global Days XXX - Global Concept Does Not Apply
PC/TC Indicator (26, TC) 9 - Not Applicable
Multiple Procedures (51) 9 - Concept does not apply.
Bilateral Surgery (50) 9 - Concept does not apply.
Physician Supervisions 09 - Concept does not apply.
Assistant Surgeon (80, 82) 9 - Concept does not apply.
Co-Surgeons (62) 9 - Concept does not apply.
Team Surgery (66) 9 - Concept does not apply.
Diagnostic Imaging Family 99 - Concept Does Not Apply
CLIA Waived (QW) No
APC Status Indicator Service Paid under Fee Schedule or Payment System other than OPPS
Type of Service (TOS) 5 - Diagnostic Laboratory
Berenson-Eggers TOS (BETOS) none
MUE 4
59 Distinct procedural service: under certain circumstances, it may be necessary to indicate that a procedure or service was distinct or independent from other non-e/m services performed on the same day. modifier 59 is used to identify procedures/services, other than e/m services, that are not normally reported together, but are appropriate under the circumstances. documentation must support a different session, different procedure or surgery, different site or organ system, separate incision/excision, separate lesion, or separate injury (or area of injury in extensive injuries) not ordinarily encountered or performed on the same day by the same individual. however, when another already established modifier is appropriate it should be used rather than modifier 59. only if no more descriptive modifier is available, and the use of modifier 59 best explains the circumstances, should modifier 59 be used. note: modifier 59 should not be appended to an e/m service. to report a separate and distinct e/m service with a non-e/m service performed on the same date, see modifier 25.
90 Reference (outside) laboratory: when laboratory procedures are performed by a party other than the treating or reporting physician or other qualified health care professional, the procedure may be identified by adding modifier 90 to the usual procedure number.
Date
Action
Notes
2024-01-01 Added First appearance in codebook.
2024-01-01 Note Grammar correction on long description.
2022-07-26 Added Code added.
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